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Molecular and cellular aspects of the impact of secondary metabolites from common barberry and hybrid goat’s rue on the HeLa cell line

https://doi.org/10.17709/2410-1893-2023-10-4-3

EDN: WNOCXO

Abstract

Purpose of the study. To isolate and verify pure fractions of secondary plant metabolites contained in B. vulgaris (L.) and P. hibridus (L.), as well as to conduct a model experiment and molecular genetic study to evaluate their cytotoxic effect in vitro on the HeLa cell line.

Materials and methods. The isolation and verification of all compounds used in the experiment were carried out using column chromatography and nuclear magnetic resonance methods at the Department of Natural Compounds, Faculty of Chemistry, Southern Federal University. Subsequently, an experiment was conducted using cultural and molecular methods on the HeLa cell line in three repetitions for each test compound; after incubation with them, the numbers of dead cells were counted on the automated NanoEnTek JuliFl counter, and the numbers of cells in apoptosis were measured by flow cytometry on the BD analyzer FACS Canto II. The level of copy number variation and expression of genes responsible for apoptosis were assessed by real-time PCR (RT-PCR). In total, three substances were studied, with two concentrations (4 and 12 μg/ml) and two exposures (24 and 72 hours) for each of them.

Results. In the first stage of the study, we isolated and verified the berberine alkaloid extracted from the roots of B. vulgaris (L.), as well as 2,4-dihydroxy-2,5-dimethylfuran-3(2H)-one and 2,2,8-trimethyldecahydroazulene-5,6-dicarbaldehyde from P. hibridus (L.). The subsequent stage of the study demonstrated the maximal cellular death under the action of berberine at a 72-hour exposure. However, the RT-PCR assessment of the copy number variation and expression of the CASP8, CASP9, CASP3, BAX, BCL2, TP53 and MDM2 genes revealed the presence of apoptosis initiation in tumor cells at the molecular level under the action of all the studied compounds: both berberine and furan and azulene derivatives derived from P. hibridus (L.).

Conclusion. All compounds used in the experiment exhibited a cytotoxic effect on the HeLa cell line. Berberine alkaloid showed the most pronounced cytotoxic effect on the HeLa line as recorded by all methods used in the study. Terpenoids 4-dihydroxy-2,5-dimethylfuran-3(2H)-one and 2,2,8-trimethyldecahydroazulene-5,6-dicarbaldehyde, when exposed to the HeLa line, caused an increase in the copy number variation and expression of the CASP9, CASP3 loci, which are among the main activators of apoptosis. They also influenced the expression of TP53 and MDM2 loci.

About the Authors

E. Yu. Zlatnik
National Medical Research Centre for Oncology of the Ministry of Health of Russia

Rostov-on-Don, Russian Federation

 

Elena Yu. Zlatnik – Dr. Sci. (Medicine), Professor, Chief Researcher, Laboratory of Immunophenotyping of Tumors, National Medical Research Centre for Oncology of the Ministry of Health of Russia, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0002-1410-122X, SPIN: 4137-7410, AuthorID: 327457, Scopus Author ID: 6603160432


Competing Interests:

Author state that there are no conflicts of interest to disclose.



Ya. S. Enin
National Medical Research Centre for Oncology of the Ministry of Health of Russia

Rostov-on-Don, Russian Federation

 

Yaroslav S. Enin – Junior Researcher, Laboratory of Molecular Oncology, National Medical Research Centre for Oncology of the Ministry of Health of Russia, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0002-4572-1579, SPIN: 7683-2286, AuthorID: 840050, Scopus Author ID: 57196464479


Competing Interests:

Author state that there are no conflicts of interest to disclose.



O. N. Burov
Southern Federal University

Rostov-on-Don, Russian Federation

 

Oleg N. Burov – Cand. Sci. (Chemistry), Associate Professor, Department of Natural and High Molecular Compounds, Faculty of Chemistry, Southern Federal University, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0002-7704-033X, SPIN: 5269-7656, AuthorID: 642948, Scopus Author ID: 23033004000, ResearcherID: A-8428-2014

 


Competing Interests:

Author state that there are no conflicts of interest to disclose.



E. S. Bondarenko
National Medical Research Centre for Oncology of the Ministry of Health of Russia

Rostov-on-Don, Russian Federation

 

Elena S. Bondarenko – Junior Researcher, Laboratory of Immunophenotyping of Tumors, National Medical Research Centre for Oncology of the Ministry of Health of Russia, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0002-8522-1026, SPIN: 3117-4040, Author ID: 865798, Scopus Author ID: 57200132337


Competing Interests:

Author state that there are no conflicts of interest to disclose.



A. B. Sagakyants
National Medical Research Centre for Oncology of the Ministry of Health of Russia

Rostov-on-Don, Russian Federation

 

Alexander B. Sagakyants – Cand. Sci. (Biology), Head of the Laboratory of Immunophenotyping of Tumors, National Medical Research Centre for Oncology of the Ministry of Health of Russia, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0003-0874-5261, SPIN: 7272-1408, AuthorID: 426904, Scopus Author ID: 24329773900, ResearcherID: U-5422-2017


Competing Interests:

Author state that there are no conflicts of interest to disclose.



D. S. Kutilin
National Medical Research Centre for Oncology of the Ministry of Health of Russia

Rostov-on-Don, Russian Federation

 

Denis S. Kutilin – Cand. Sci. (Biology), Leading Researcher, Laboratory of Molecular Oncology, National Medical Research Centre for Oncology of the Ministry of Health of Russia, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0002-8942-3733, SPIN: 8382-4460, AuthorID: 794680, Scopus Author ID: 55328886800


Competing Interests:

Author state that there are no conflicts of interest to disclose.



Yu. V. Dzigunova
Southern Federal University

Rostov-on-Don, Russian Federation

 

Yulia V. Dzigunova – Senior Lecturer in the Department of Botany at the Academy of Biology and Biotechnology named after D. I. Ivanovsky, Southern Federal University, Rostov-on-Don, Russian Federation

 

SPIN: 2204-2967, AuthorID: 1062681


Competing Interests:

Author state that there are no conflicts of interest to disclose.



O. G. Ishonina
National Medical Research Centre for Oncology of the Ministry of Health of Russia

Rostov-on-Don, Russian Federation

 

Olga G. Ishonina – Cand. Sci. (Biology), Head of the Department of Training and Retraining of Specialists, National Medical Research Centre for Oncology of the Ministry of Health of Russia, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0002-5300-1213, SPIN: 4051-5165, AuthorID: 612417, Scopus Autor ID: 37115461900


Competing Interests:

Author state that there are no conflicts of interest to disclose.



E. V. Shalashnaya
National Medical Research Centre for Oncology of the Ministry of Health of Russia

Rostov-on-Don, Russian Federation

 

Elena V. Shalashnaya – Cand. Sci. (Biology), Senior Researcher, Laboratory for the Study of the Pathogenesis of Malignant Tumors, National Medical Research Centre for Oncology of the Ministry of Health of Russia, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0001-7742-4918, SPIN: 2752-0907, AuthorID: 476968, Scopus Autor ID: 55144159900, ResearcherID: AAE-4085-2022


Competing Interests:

Author state that there are no conflicts of interest to disclose.



N. D. Ushakova
National Medical Research Centre for Oncology of the Ministry of Health of Russia

Rostov-on-Don, Russian Federation

 

Nataliya D. Ushakova – Dr. Sci. (Medicine), Professor, anesthesiologist-resuscitator, Department of Anesthesiology and Intensive Care, National Medical Research Centre for Oncology of the Ministry of Health of Russia, Rostov-on-Don, Russian Federation

ORCID: https://orcid.org/0000-0002-0068-0881, SPIN: 9715-2250, AuthorID: 571594, Scopus Author ID: 8210961900


Competing Interests:

Author state that there are no conflicts of interest to disclose.



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Zlatnik E.Yu., Enin Ya.S., Burov O.N., Bondarenko E.S., Sagakyants A.B., Kutilin D.S., Dzigunova Yu.V., Ishonina O.G., Shalashnaya E.V., Ushakova N.D. Molecular and cellular aspects of the impact of secondary metabolites from common barberry and hybrid goat’s rue on the HeLa cell line. Research and Practical Medicine Journal. 2023;10(4):31-47. (In Russ.) https://doi.org/10.17709/2410-1893-2023-10-4-3. EDN: WNOCXO

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ISSN 2410-1893 (Online)